MEMSAT PREDICTION RESULTS:
Summary of topology analysis:
1 helix (+) : Score = 1.49
1 helix (-) : Score = 1.866
2 helices (+) : Score = -100000
2 helices (-) : Score = -100000
3 helices (+) : Score = -100000
3 helices (-) : Score = -100000
4 helices (+) : Score = -100000
4 helices (-) : Score = -100000
5 helices (+) : Score = -100000
5 helices (-) : Score = -100000
6 helices (+) : Score = -100000
6 helices (-) : Score = -100000
7 helices (+) : Score = -100000
7 helices (-) : Score = -100000
8 helices (+) : Score = -100000
8 helices (-) : Score = -100000
9 helices (+) : Score = -100000
9 helices (-) : Score = -100000
10 helices (+) : Score = -100000
10 helices (-) : Score = -100000
11 helices (+) : Score = -100000
11 helices (-) : Score = -100000
12 helices (+) : Score = -100000
12 helices (-) : Score = -100000
13 helices (+) : Score = -100000
13 helices (-) : Score = -100000
14 helices (+) : Score = -100000
14 helices (-) : Score = -100000
15 helices (+) : Score = -100000
15 helices (-) : Score = -100000
16 helices (+) : Score = -100000
16 helices (-) : Score = -100000
17 helices (+) : Score = -100000
17 helices (-) : Score = -100000
18 helices (+) : Score = -100000
18 helices (-) : Score = -100000
19 helices (+) : Score = -100000
19 helices (-) : Score = -100000
20 helices (+) : Score = -100000
20 helices (-) : Score = -100000
FINAL PREDICTION
================
1: (out) 318-336 (1.87)
10 20 30 40 50 60
------------------------------------------------------------
MVDKNRTLHELSSKNFSRTPNGLIFTNDLKTVYSIFLICLDLKEKKHSSDTKSFLLTAFT
70 80 90 100 110 120
------------------------------------------------------------
KHFHFTFTYQEAIKAMGQLELKVDMNTTCINVSYNIKPSLARHLLTLFMSSKLLHTPQDR
130 140 150 160 170 180
------------------------------------------------------------
TRGEPKEKVLFQPTPKGVAVLQKYVRDIGLKTMPDILLSSFNSMKLFTFERSSVTDSIIH
190 200 210 220 230 240
------------------------------------------------------------
SDYLIHILFIKMMGAKPNVWSPTNADDPLPCLSSLLEYTNNDDTFTFEKSKPEQGWQAQI
250 260 270 280 290 300
------------------------------------------------------------
GNIDINDLERVSPLAHRFFTNPDSESHTQYYVSNAGIRLFENKTFGTSKKIVIKYTFTTK
310 320 330 340 350 360
-----------------OOOOXXXXXXXXXXXIIII++++++++++++++++++++++++
AIWQWIMDCTDIMHVKEAVSLAALFLKTGLIVPVLLQPSRTDKKKFQISRSSFFTLSKRG
370 380 390 400 410 420
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
WDLVSWTGCKSNNIRAPNGSTIDLDFTLRGHMTVRDEKKTLDDSEGFSQDMLISSSNLNK
430 440 450 460 470 480
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
LDYVLTDPGMRYLFRRHLEKELCVENLDVFIEIKRFLKKMTILKKLIDSKHCDKKSNTST
490 500 510 520 530 540
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
SKNNIVKTIDSALMKQANECLEMAYHIYSSYIMIGSPYQLNIHHNLRQNISDIMLHPHSP
550 560 570 580 590 600
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
LSEHFPTNLYDPSPASAESAASSISSTEADTLGEPPEVSLKPSKNLSNENCSFKKQGFKH
610 620 630 640 650 660
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
QLKEYKPAPLTLAETHSPNASVENSHTIVRYGMDNTQNDTKSVESFPATLKVLRKLYPLF
670 680 690 700
++++++++++++++++++++++++++++++++++++++++
EIVSNEMYRLMNNDSFQKFTQSDVYKDASALIEIQEKCCC
--- Key:
+ : Inside loop
- : Outside loop
O : Outside helix cap
X : Central transmembrane helix segment
I : Inside helix cap
---