What protein has this sequence IEESQFAIVVFSENY?
TMV resistance protein N-tobacco
What species did it come from?
Nicotiana glutinosa
The other species that has a high degree of sequence similarity is resistance protein RPP5 in Arabidopsis thaliana. The evidence follows: (the explanation of this evidence is on my written portion of the test):
Reference: Altschul, Stephen F., Warren Gish, Webb Miller, Eugene W. Myers, and David J. Lipman (1990). Basic local alignment search tool. J. Mol. Biol. 215:403-10.
Query= tmpseq_1 (15 letters)
Database: Non-redundant GenBank CDS translations+PDB+SwissProt+SPupdate+PIR 295,090 sequences; 88,655,441 total letters. Searching..................................................done
Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N
pir||A54810 TMV resistance protein N - tobacco (Nico... 73 0.013 1
gnl|PID|e1250343 (AL021768) resistance protein RPP5 - lik... 57
pir||A54810 TMV resistance protein N - tobacco (Nicotiana glutinosa) gi|558887 (U15605) N [Nicotiana glutinosa] Length = 1144
Score = 73 (33.5 bits),
Expect = 0.013, P = 0.013
Identities = 15/15 (100%),
Positives = 15/15 (100%)
Query: 1 IEESQFAIVVFSENY 15
IEESQFAIVVFSENY
Sbjct: 63 IEESQFAIVVFSENY 77
gnl|PID|e1250343 (AL021768) resistance protein RPP5 - like [Arabidopsis thaliana] Length = 1715
Score = 57 (26.2 bits),
Expect = 2.1, P = 0.88
Identities = 11/15 (73%),
Positives = 13/15 (86%)
Query: 1 IEESQFAIVVFSENY 15
I+ES A+VVFSENY
Sbjct: 1418 IKESSIAVVVFSENY 1432
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