Caenorhabditis elegans
LOCUS 1184599
3054 bp DNA
INV 26-JAN-2000
DEFINITION Gene from: Caenorhabditis elegans cosmid ZK593, complete
sequence.
ACCESSION 1184599
VERSION 1184599
KEYWORDS HTG; Dynactin; Human XE169 like; Microtubule-associated
protein 1
like; Pyruvate kinase; Tyrosine-protein kinase; Yeast JTA107 like.
SOURCE Caenorhabditis elegans.
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Nematoda; Secernentea; Rhabditia; Rhabditida;
Rhabditina; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.
REFERENCE 1 (bases 152 to 3205)
AUTHORS none.
TITLE Genome sequence of the nematode
C. elegans: a platform for
investigating biology. The C. elegans Sequencing Consortium
JOURNAL Science 282 (5396), 2012-2018 (1998)
MEDLINE 99069613
REMARK The C.elegans Sequencing Consortium.
Erratum:[[published errata appear in Science 1999 Jan
1;283(5398):35 and 1999 Mar 26;283(5410):2103 and 1999 Sep
3;285(5433):1493]]
REFERENCE 2 (bases 152 to 3205)
AUTHORS McMurray,A.A.
TITLE Direct Submission
JOURNAL Submitted (10-FEB-1996) Nematode Sequencing
Project, Sanger Centre,
Hinxton, Cambridge CB10 1RQ, England and Department of Genetics,
Washington University, St. Louis, MO 63110, USA. E-mail:
jes@sanger.ac.uk or rw@nematode.wustl.edu
COMMENT Coding sequences below are predicted
from computer analysis, using
predictions from Genefinder (P. Green, U. Washington), and other
available information.
For a graphical representation of this sequence and its analysis
see:-
http://webace.sanger.ac.uk/cgi-
bin/display?db=wormace&class=Sequence &object=ZK593
Current sequence finishing criteria for the C. elegans genome
sequencing consortium are that all bases are either sequenced
unambiguously on both strands, or on a single strand with both a
dye primer and dye terminator reaction, from distinct subclones.
Exceptions are indicated by an explicit note.
IMPORTANT: This sequence is NOT necessarily the entire insert of
the specified clone. It may be shorter because we only sequence
overlapping sections once, or longer because we arrange for a small
overlap between neighbouring submissions.
This sequence is the entire insert of clone ZK593. The true right
end of clone ZK596 is at 23039 in this sequence. The start of this
sequence (1..104) overlaps with the end of sequence Z69386.
The end of this sequence (33399..33498) overlaps with the start of
sequence AL034365.
FEATURES
Location/Qualifiers
gene
1..3054
/gene="ZK593.1"
CDS
join(1..23,91..286,873..1387,1451..1808,2474..2640,
2689..2807,2885..3054)
/gene="ZK593.1"
/note="Similarity to Chicken pyruvate kinase
(SW:KPYK_CHICK); cDNA EST EMBL:T01521 comes from this
gene; cDNA EST EMBL:C09788 comes from this gene; cDNA EST
yk401b12.5 comes from this gene"
/codon_start=1
/protein_id="CAA93424.2"
/db_xref="PID:g5824898"
/db_xref="GI:5824898"
/db_xref="SPTREMBL:Q23539"
/translation="MYQDDHIGSEHSSATTNISHLCGLRISERPQKTRKTGVICTIGP
ACSDVETLRKMINTGMNIARLNFSHGTHEAHAATIKTIREAAENAPFPVAIALDTKGP
EIRTGMFANNMKEVQLENGKSVRVSTDPSMEFAATSSHIYADYRNLPKVVQPGSRIYI
DDGLISLIVESCEETAVICTIENGGALGTRKGVNLPGTIVDLPAVTSKDIEDLLFGVE
QGVDIIFASFIRNADGIHKIRQVLGEKGKHIYIIAKIESEDGVTNCDEIIEASDGVMV
ARGDLGIEIPAEKVFLAQKMLIAKCNLAGKPVICATQMLESMITKPRPTRAECSDVAN
AVLDGVDCVMLSGETAKGDYPVEALAIMHNICKEAESAFFHMKHFEELILHTKKPTGM
THTTAIAAVSATITCRAVAIILITTTGKTARLCSRYRPPVPIITVSRDERISRQLHLH
RGIFPVYYPKGRIDEWDVDVEERVQYGVNLGKTRGFIHLGDPLIVITGWKQGAGFTNT
MRIVVAT"
BASE COUNT 1031 a 489 c
543 g 991 t
ORIGIN
1 atgtatcagg acgatcatat
cgggtaagca atcactcttt ttttcgccca taatcattcc
61 actttttgac ctaatgtcgt tgcattccag
ttcagagcat tcatctgcta ctactaatat
121 ttctcattta tgcggacttc ggatctcgga
gagacctcaa aaaacaagaa aaactggtgt
181 tatttgcact atcggaccag cgtgtagtga
tgtagagaca ctgagaaaaa tgataaacac
241 tggaatgaat attgccagat tgaatttctc
acatggaact cacgaggtga tttattttaa
301 catttttatt aacttaagtt ggattatata
aatttcaaaa acatatttat gtttgtagta
361 taacaaatat caaagtaaaa cacaaacgtt
tcacaaggaa ttttgaaatt ttttaaattt
421 aaattcaaaa agtggcaatc gcgtagtttt
tgccactcat aattcggaaa gtcgatcttt
481 tttttcagat tttgcaaact ctttttcttt
ttttttcaaa ttttgcaacc aaattttgca
541 ttttgcattt caaattttgg caaccgaaat
tttaaagttt ctctacatag gactttgtga
601 atctgcatat tttgcatctg gatatttagt
cctggcgtca gtgaatatcg ccttttcaca
661 tgtaaaaata ataataagct aaccaattga
agacagaata aaaaacattg aaaactgaaa
721 tatagattaa acttttttga agatgaaact
gttcatggtc gcaatatttt gtttgaaaaa
781 caaataattg atttatttgt ttctcgttaa
tttaagacat tatttgtaaa aaataatgta
841 tcaggcacag aaaaagaaac aaataatttc
aggcacatgc tgcaacaatc aagacaatcc
901 gtgaagctgc tgaaaatgct ccattcccgg
tcgcaattgc tcttgacacc aaaggacctg
961 aaattcgtac cggaatgttt gccaataata
tgaaagaagt tcaattggaa aatgggaaaa
1021 gtgttcgagt ttccacagat ccatctatgg aatttgctgc
aacatcttct catatttatg
1081 ctgactacag aaatcttcca aaagttgttc aacctggttc
aagaatctat attgatgacg
1141 gattgatttc tttaatcgtc gaaagttgtg aagaaacagc
agttatatgt acaattgaaa
1201 atggaggagc tcttggaaca cggaaaggtg ttaatcttcc
tggaactatt gttgatcttc
1261 ctgcagtcac atcaaaagat atcgaagatt tattatttgg
agttgagcaa ggtgttgata
1321 ttatttttgc atcattcatc agaaatgccg acggaattca
taaaattcga caagttcttg
1381 gagaaaagtg agtgaaaaac ataaactttc ttgattgctg
actgccattc cttaaaactt
1441 aatttttcag aggaaagcat atttacataa ttgcaaaaat
cgaatcagaa gatggagtca
1501 ctaattgcga tgaaatcatc gaagcatccg atggagtaat
ggttgcaaga ggagatcttg
1561 gaattgaaat tcctgcggag aaagtattcc tcgcccagaa
aatgctcatt gccaaatgta
1621 atctggcggg aaaacctgtg atatgtgcaa cccagatgct
cgagagcatg atcaccaaac
1681 ctcgtccgac tagagcagaa tgcagtgacg tggcaaacgc
tgtcttggat ggagttgact
1741 gtgtgatgtt gagtggagaa actgcaaaag gagattatcc
agttgaagca ttggcgatta
1801 tgcataatgt aagtttatat aattttgttt tatgggtttc
gtttaatgaa aattttgaaa
1861 tttagaaaat gaattttgtt gggatacatt tcaatcgata
tatcctttaa aatgtttaca
1921 acaaaagttt gagaggtttt ctgagttctt ctaaaaaatt
tggtcattag gattcatttt
1981 taatcttttg atgaaataaa atattgatgc tccatcgcta
agagaaaact gtttggaatt
2041 tttcaaaaaa tcacgtgata aaaaagtgtc gggttacaag
tgatgtgaga caatttttaa
2101 aataaatcgg agagtatcac aaatcataag ccagaccaaa
aactgaaaat tgtgtatgta
2161 aatttaaaca aattaataat gaattatggg aaaaagtaaa
caaaaattgt atttcctcta
2221 ataatcttgc acccgatttt tcaactttgg cagctcctat
ctcagttgtc tttttcaaaa
2281 attatcaacg tcataaaagt ttgttgtttc ttccaaaata
gttttgcaga tatttttttt
2341 actatttaca acgcaccgag atatatgtga tcaaattaga
ttaagtggat gcgagattaa
2401 tggaggattc tagtatgact caattgaaca gaaaaataaa
aactagttgc aaatcaatat
2461 tttttaattt cagatctgca aagaagcaga atctgcattc
ttccatatga aacattttga
2521 agagcttatt cttcatacca agaaaccaac tggaatgact
catacaactg caattgcagc
2581 tgtttctgca acaatcacat gccgtgctgt cgctattatt
ctcatcacaa caacgggaaa
2641 gtaagttatt aaaaatcatt ggcattggaa attaatatta
aattctagaa ccgcccgtct
2701 atgttcccga taccgtccac cagttccaat tattactgtt
tctcgtgatg aacgaatctc
2761 tcgtcaactt catcttcaca gaggaatctt tcctgtttac
tatccaagtg agagtttttc
2821 ttttcagaaa attgtgcttt ctaaaattat ttcattccaa
atattataaa aaatataatt
2881 tcagagggac gtattgatga atgggatgtt gatgttgagg
aacgtgtgca atacggagta
2941 aatcttggta agacacgtgg attcattcat cttggagatc
cacttattgt gatcactgga
3001 tggaagcaag gagctggatt cacaaacacc atgagaattg
tagttgccac ctaa
3061
3121
3181
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