Other Formats:
Links:
LOCUS HUMACTSM1
976 bp DNA
PRI 30-OCT-1994
DEFINITION Human smooth muscle actin gene (aortic): exon 1 &
ivs flanks.
ACCESSION K01741
NID g178059
KEYWORDS actin.
SEGMENT 1 of 7
SOURCE Human DNA, clone lambda-Ha201.
ORGANISM Homo sapiens
Eukaryotae; mitochondrial eukaryotes; Metazoa; Chordata;
Vertebrata; Eutheria; Primates; Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 976)
AUTHORS Ueyama,H., Hamada,H., Battula,N. and Kakunaga,T.
TITLE Structure of a human smooth muscle
actin gene (aortic type) with a
unique intron site
JOURNAL Mol. Cell. Biol. 4 (6), 1073-1078 (1984)
MEDLINE 84245506
COMMENT [1] the amino acid sequences deduced
from these nucleotide
sequences are identical to those reported for bovine aortic smooth
muscle actin (Vandekerckhove,J., and Weber,K. (1979) 14, 123-133),
except for codon 309, in which codon gcn for alanine is replaced by
codon ftc for valine.
FEATURES
Location/Qualifiers
source
1..976
/organism="Homo sapiens"
/db_xref="taxon:9606"
/map="10q22-q24"
exon
<200..328
/gene="ACTA2"
/note="actin prepeptide; G00-125-197"
intron
329..>976
/gene="ACTA2"
/note="actin intron 1"
BASE COUNT 295 a 205
c 193 g 283 t
ORIGIN 1 base upstream of HindIII site.
1 aagcttatag tgtaactaaa
gtacttccag atacatgcta tattagataa gggtcagagg
61 atagcactag gacacagagg agggccccca
aacccagcct tggacgtggg agttgtcagg
121 taagtgccac aaatgcccaa ttacagctga
ggctgcttcc tccctgtttt ctatagaatc
181 ctgtgaagca gctccagcta tgtgtgaaga
agaggacagc actgccttgg tgtgtgacaa
241 tggctctggg ctctgtaagg ccggctttgc
tggggacgat gctcccaggg ctgttttccc
301 atccattgtg ggacgtccca gacatcaggt
gaggaaaatt atgattggaa cataacagga
361 cacagattag gttcctctgt gttcatgttt
atccccagat tgtctatctc tttctgccca
421 gaagttatgt aaccttgtta caaatagacc
tctaatgatt aaggtccagg agtaaatgcc
481 aattcacata taatgtagac agattatctg
atgggcatct atcagataca aagtctgccc
541 ctttttcatg tcctttttgt ctaaatatag
tcattatcat catcatcatc atcatcaaat
601 catttcatca ccatcagaaa tgcttataca
ttatcctgat gtataccaaa gctactgttt
661 ggaaagaaac taaaataaaa gtccaggtca
cttaaccata cagggctgat gttagatgaa
721 agcaagcatc gataccaaat gcaattttac
ataatattac ctgtcaacaa aatatatttg
781 gacagccgca tggtaatttt acacattatg
tgtaaacaaa gtattggtgg catcacatgg
841 taaaaactca gtaatttcac ctcagaaatt
ctcctccaca ccagaaatgt agtttgtgca
901 ttgaggctat ctgattgatg tttatgcctc
tctgcttggg atatattcat gagaataaat
961 aatagaaacc tctccc
//
LOCUS HUMACTSM2
292 bp DNA
PRI 30-OCT-1994
DEFINITION Human smooth muscle actin gene (aortic): exon 2 and
ivs flanks.
ACCESSION K01742
NID g178060
KEYWORDS actin.
SEGMENT 2 of 7
SOURCE Human DNA, clone lambda-Ha201.
ORGANISM Homo sapiens
Eukaryotae; mitochondrial eukaryotes; Metazoa; Chordata;
Vertebrata; Eutheria; Primates; Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 292)
AUTHORS Ueyama,H., Hamada,H., Battula,N. and Kakunaga,T.
TITLE Structure of a human smooth muscle
actin gene (aortic type) with a
unique intron site
JOURNAL Mol. Cell. Biol. 4 (6), 1073-1078 (1984)
MEDLINE 84245506
FEATURES
Location/Qualifiers
source
1..292
/organism="Homo sapiens"
/db_xref="taxon:9606"
/map="10q22-q24"
intron
<1..149
/gene="ACTA2"
/note="actin intron 1"
exon
150..278
/gene="ACTA2"
/note="G00-125-197"
/number=2
intron
279..>292
/gene="ACTA2"
/note="actin intron 2"
BASE COUNT 88 a
54 c 78 g 72 t
ORIGIN 45 bases upstream of MboII site.
1 catagtggca atgagactca
atatgtttat tgttgctgat aaccagaaga ggaacttccc
61 atctcaatca cttaaccttt tgtggcttgg
ctgtaactga ttcacaagtt ttgggagatg
121 ctgactcata atgtgttgaa cctttttagg
gggtgatggt gggaatggga caaaaagaca
181 gctacgtggg tcacgaagca cagagcaaaa
gaggaatcct gaccctgaag tacccgatag
241 aacatggcat catcaccaac tgggacgaca
tggaaaaggt atgggaggtt gc
//
LOCUS HUMACTSM3
223 bp DNA
PRI 30-OCT-1994
DEFINITION Human smooth muscle actin gene (aortic): exon 3 and
ivs flanks.
ACCESSION K01743
NID g178061
KEYWORDS actin.
SEGMENT 3 of 7
SOURCE Human DNA, clone lambda-Ha201.
ORGANISM Homo sapiens
Eukaryotae; mitochondrial eukaryotes; Metazoa; Chordata;
Vertebrata; Eutheria; Primates; Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 223)
AUTHORS Ueyama,H., Hamada,H., Battula,N. and Kakunaga,T.
TITLE Structure of a human smooth muscle
actin gene (aortic type) with a
unique intron site
JOURNAL Mol. Cell. Biol. 4 (6), 1073-1078 (1984)
MEDLINE 84245506
FEATURES
Location/Qualifiers
source
1..223
/organism="Homo sapiens"
/db_xref="taxon:9606"
/map="10q22-q24"
intron
<1..43
/gene="ACTA2"
/note="actin intron 2"
exon
44..154
/gene="ACTA2"
/note="G00-125-197"
/number=3
intron
155..>223
/gene="ACTA2"
/note="actin intron 3"
BASE COUNT 57 a
70 c 48 g 48 t
ORIGIN 42 bases upstream of BglII site.
1 acagcacatc attgtgtttc
tcctctgtcc cccaactcac tagatctggc accactcttt
61 ctacaatgag cttcgtgttg cccctgaaga
gcatcccacc ctgctcacgg aggcacccct
121 gaaccccaag gccaaccggg agaaaatgac
tcaagtaagt atgctacccc agcacacaac
181 actgtggggt ctggggaaac ttctgttaga
aggaggctat gca
//
LOCUS HUMACTSM4
203 bp DNA
PRI 30-OCT-1994
DEFINITION Human smooth muscle actin gene (aortic): exon 4 and
ivs flanks.
ACCESSION K01744
NID g178062
KEYWORDS actin.
SEGMENT 4 of 7
SOURCE Human DNA, clone lambda-Ha201.
ORGANISM Homo sapiens
Eukaryotae; mitochondrial eukaryotes; Metazoa; Chordata;
Vertebrata; Eutheria; Primates; Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 203)
AUTHORS Ueyama,H., Hamada,H., Battula,N. and Kakunaga,T.
TITLE Structure of a human smooth muscle
actin gene (aortic type) with a
unique intron site
JOURNAL Mol. Cell. Biol. 4 (6), 1073-1078 (1984)
MEDLINE 84245506
FEATURES
Location/Qualifiers
source
1..203
/organism="Homo sapiens"
/db_xref="taxon:9606"
/map="10q22-q24"
intron
<1..74
/gene="ACTA2"
/note="actin intron 3"
exon
75..159
/gene="ACTA2"
/note="G00-125-197"
/number=4
intron
160..>203
/gene="ACTA2"
/note="actin intron 5"
BASE COUNT 35 a
53 c 56 g 59 t
ORIGIN 50 bases upstream of the DdeI
site.
1 ccaggtgtgc tctcctgacc
attctttgtc agatgggcac cttcactaac tcagctcttt
61 ggattgcttt gcagattatg tttgagactt
tcaatgtccc agccatgtat gtggctatcc
121 aggcggtgct gtctctctat gcctctggac
gcacaactgg taggtggctg ggcgggacag
181 caagctggtt ggagcgcact gcc
//
LOCUS HUMACTSM5
530 bp DNA
PRI 30-OCT-1994
DEFINITION Human smooth muscle actin gene (aortic): exon 5 and
ivs flanks.
ACCESSION K01745
NID g178063
KEYWORDS actin.
SEGMENT 5 of 7
SOURCE Human DNA, clone lambda-Ha201.
ORGANISM Homo sapiens
Eukaryotae; mitochondrial eukaryotes; Metazoa; Chordata;
Vertebrata; Eutheria; Primates; Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 530)
AUTHORS Ueyama,H., Hamada,H., Battula,N. and Kakunaga,T.
TITLE Structure of a human smooth muscle
actin gene (aortic type) with a
unique intron site
JOURNAL Mol. Cell. Biol. 4 (6), 1073-1078 (1984)
MEDLINE 84245506
FEATURES
Location/Qualifiers
source
1..530
/organism="Homo sapiens"
/db_xref="taxon:9606"
/map="10q22-q24"
intron
<1..313
/gene="ACTA2"
/note="actin intron 4"
exon
314..475
/gene="ACTA2"
/note="G00-125-197"
/number=5
intron
476..>530
/gene="ACTA2"
/note="actin intron 6"
BASE COUNT 106 a 153
c 113 g 158 t
ORIGIN 48 bases upstream of the BglII
site.
1 cggactggag ttgagttaga
atggacacgg ctgaacccag ccctaaaaga tcttcttcta
61 gtgttcaaaa taagcccttg atctcatatt
tctagcagaa cttttttcta ctgttttcct
121 cttcctgttc ttttactttt tttcatcttc
cccgagccct gtcccacctc acctctccta
181 tcacatgccc tgttttctct ttttaaataa
gaggctcgga aattccctct cccccagggc
241 ttccctctac ttgtccagca agtaaccaca
tgccagctgc catggtgact tatcacgccc
301 aattgtctcc caggcatcgt gctggactct
ggagatggtg tcacccacaa tgtccccatc
361 tatgagggct atgccttgcc ccatgccatc
atgcgtctgg atctggctgg ccgagatctc
421 actgactacc tcatgaagat cctgactgag
cgtggctatt ccttcgttac tactggtgag
481 gcctgtggga gataaggggg agaggggagc
agtgtgttgc tcagtacctc
//
LOCUS HUMACTSM6
269 bp DNA
PRI 30-OCT-1994
DEFINITION Human smooth muscle actin gene (aortic): exon 6 and
ivs flanks.
ACCESSION K01746
NID g178064
KEYWORDS actin.
SEGMENT 6 of 7
SOURCE Human DNA, clone lambda-Ha201.
ORGANISM Homo sapiens
Eukaryotae; mitochondrial eukaryotes; Metazoa; Chordata;
Vertebrata; Eutheria; Primates; Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 269)
AUTHORS Ueyama,H., Hamada,H., Battula,N. and Kakunaga,T.
TITLE Structure of a human smooth muscle
actin gene (aortic type) with a
unique intron site
JOURNAL Mol. Cell. Biol. 4 (6), 1073-1078 (1984)
MEDLINE 84245506
FEATURES
Location/Qualifiers
source
1..269
/organism="Homo sapiens"
/db_xref="taxon:9606"
/map="10q22-q24"
intron
<1..42
/gene="ACTA2"
/note="actin intron 5"
exon
43..234
/gene="ACTA2"
/note="G00-125-197"
/number=6
intron
235..>269
/gene="ACTA2"
/note="actin intron 6"
BASE COUNT 65 a
65 c 72 g 67 t
ORIGIN 43 bases upstream of the DdeI
site.
1 cagaccctaa tgtttgccac
aatgtttgta tctggttgac agctgagcgt gagattgtcc
61 gggacatcaa ggagaaactg tgttatgtag
ctctggactt tgaaaatgag atggccactg
121 ccgcatggtc atcctccctt gagaagagtt
acgagttgcc tgatgggcaa gtgatcacca
181 tcggaaatga acgtttccgc tgcccagaga
ccctgttcca gccatccttc atcggtaggc
241 aacaaacgcc cttttcctgg gaaggggag
//
LOCUS HUMACTSM7
408 bp DNA
PRI 30-OCT-1994
DEFINITION Human smooth muscle actin gene (aortic): exon 7 and
ivs flanks.
ACCESSION K01747
NID g178065
KEYWORDS actin.
SEGMENT 7 of 7
SOURCE Human DNA, clone lambda-Ha201.
ORGANISM Homo sapiens
Eukaryotae; mitochondrial eukaryotes; Metazoa; Chordata;
Vertebrata; Eutheria; Primates; Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 408)
AUTHORS Ueyama,H., Hamada,H., Battula,N. and Kakunaga,T.
TITLE Structure of a human smooth muscle
actin gene (aortic type) with a
unique intron site
JOURNAL Mol. Cell. Biol. 4 (6), 1073-1078 (1984)
MEDLINE 84245506
FEATURES
Location/Qualifiers
source
1..408
/organism="Homo sapiens"
/db_xref="taxon:9606"
/map="10q22-q24"
gene
join(K01741:200..976,K01742:1..292,K01743:1..223,
K01744:1..203,K01745:1..530,K01746:1..269,1..279)
/gene="ACTA2"
CDS
join(K01741:200..328,K01742:150..278,K01743:44..154,
K01744:75..159,K01745:314..475,K01746:43..234,98..279)
/partial
/gene="ACTA2"
/note="actin prepeptide"
/codon_start=1
/db_xref="GDB:G00-125-197"
/db_xref="PID:g178067"
/translation="MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQG
VMVGMGQKDSYVGHEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEE
HPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDG
VTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKL
CYVALDFENEMATAAWSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGI
HETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIVDRMQKEITALAPSTMKIK"
exon
98..279
/gene="ACTA2"
/note="actin prepeptide (exon 6); putative"
exon
98..>279
/gene="ACTA2"
/note="actin prepeptide; G00-125-197"
/number=6
intron
280..>408
/note="intron 7"
BASE COUNT 110 a 102
c 97 g 99 t
ORIGIN 43 bases upstream of the DdeI
site.
1 cactgcgaag atcatccaga
tgttcaagtc tggtcttcca tgtctagcct aggttttact
61 ctccacttaa ggaccatggc ctgtgtctct
tttccaggga tggagtctgc tggcatccat
121 gaaaccacct acaacagcat catgaagtgt
gatattgaca tcaggaagga cctctatgct
181 aacaatgtcc tatcaggggg caccactatg
taccctggca ttgtcgaccg aatgcagaag
241 gagatcacgg ccctagcacc cagcaccatg
aagatcaagg tactgttcag tgacagaccc
301 agtggcaatg ccgccagcag tgtcagccca
taaccacaga taagaactct tcagagactg
361 tattttggtg acatgcaatt gtgggtttta
ggggtaggta atgacaca
//
the above report in
format