LOCUS AF006675
3290 bp DNA
BCT 20-AUG-1997
DEFINITION Rhodothermus marinus DNA helicase (dnaB) gene, complete
cds.
ACCESSION AF006675
NID g2335166
KEYWORDS .
SOURCE Rhodothermus marinus.
ORGANISM Rhodothermus marinus
Eubacteria; Cytophagales; Rhodothermus.
REFERENCE 1 (bases 1 to 3290)
AUTHORS Liu,X.Q. and Hu,Z.
TITLE A DnaB intein in rhodothermus
marinus: indication of recent intein
homing across remotely related organisms
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 94 (15), 7851-7856
(1997)
MEDLINE 97368281
REFERENCE 2 (bases 1 to 3290)
AUTHORS Liu,X.Q. and Hu,Z.
TITLE Direct Submission
JOURNAL Submitted (04-JUN-1997) Biochemistry Department,
Dalhousie
University, Halifax, Nova Scotia B3H 4H7, Canada
FEATURES
Location/Qualifiers
source
1..3290
/organism="Rhodothermus marinus"
/db_xref="taxon:29549"
gene
310..3135
/gene="dnaB"
CDS
310..3135
/gene="dnaB"
/codon_start=1
/transl_table=11
/product="DNA helicase"
/db_xref="PID:g2335167"
/translation="MAEFEERPRLSIGEEEAPPYPLEKLTGGRRTRAQIHALHQQAGR
VPPQAVELEQAVLGAMLIEPEAIPRALEILTPEAFYDGRHQRIFRAIVRLFEQNRGVD
LLTVTEELRRTGELEQAGDTIYLSELTTRVASAANVEYHARIIAEKLLRRMIEVMTLL
VGRAYDPAADAFELLDEVEAEIFRLSDVHLRKAARSMNEVVKETLERLEAIHGRPGGI
TGVPSGFHQLDALTGGWQRGDLIIIAARPSMGKTAFALSCRNAALHPHYGTGVAIFSL
EMGAEQLAQRLLTAEAASMPRRPAPDGCATRTGVSWPARRPLSDAPIFIDDTPSLGVL
ELRAKCRRLKAEHDIGLVIVDYLQLMQASHMPRNANREQEIAQISRSLKALAKELNVP
VVALSQLSRAVETRGGDKRPQLSDLRESGCLAGDTLITLADGRRVPIRELVSQQNFSV
WALNPQTYRLERARVSRAFCTGIKPVYRLTTRLGRSIRATANHRFLTPQGWKRVDELQ
PGDYLALPRRIPTASTPTLTEAELALLGHLIGDGCTLPHHVIQYTSRDADLATLVAHL
ATKVFGSKVTPQIRKELRWYQVYLRAARPLAPGKRNPISDWLRDLGIFGLRSYEKKVP
ALLFCQTSEAIATFLRHLWATDGCIQMRRGKKPYPAVYYATSSYQLARDVQSLLLRLG
INARLKTVAQGEKGRVQYHVKVSGREDLLRFVEKIGAVGARQRAALASVYDYLSVRTG
NPNRDIIPVALWYELVREAMYQRGISHRQLHANLGMAYGGMTLFRQNLSRARALRLAE
AAACPELRQLAQSDVYWDPIVSIEPDGVEEVFDLTVPGPHNFVANDIIAHNSIEQDAD
VVLFIYRPERYGITVDENGNPTEGIAEIIIGKQRNGPTGTVRLAFINQYARFENLTMY
QPEPGTPLPETPDETILPSGPPDEAPF"
BASE COUNT 638 a 1082 c
979 g 591 t
ORIGIN
1 ggatcccagc cggacgagat
cgaagcgcac ctgcccattc tgtacaaaca gatcgcgctg
61 gtgaagcccc ggatcatcct gtgtgtgggg
cgcattgcgg caatgcgttg ctgggccgga
121 acggttcgct gcgtgccctt cgggcaaggt
gcacgacttt cacgggctgc cggtcgtcgt
181 caccttccac ccggtcgccc ttgcgcaacc
cccagtggaa gcggctggcc tgggaagatc
241 tccagctgct gcgcgcccac tacgatcgcc
tgatgggcac ggcaacgcgc tgaaacctgc
301 aggaaaacca tggccgagtt tgaggagcgt
ccccggttga gcattggcga agaggaagcg
361 ccgccctacc cgctggagaa gctgaccggc
gggcgacgca cgcgtgccca gattcatgcg
421 ctgcaccagc aggccggacg cgtgccgccc
caggccgtcg agctggagca ggccgtgctc
481 ggcgccatgc tcatcgagcc ggaggcgatc
ccccgggcac tggagatcct gacgcccgag
541 gccttctacg acggccgcca ccagcgcatc
tttcgggcca tcgtccggct gttcgagcag
601 aaccggggcg tcgatctgct gacggttacc
gaggagctgc ggcgcacggg cgagctggag
661 caggccggcg acacgatcta cctgagcgaa
ctgaccaccc gcgtggcctc ggcggccaac
721 gtcgaatacc acgcccggat catcgccgag
aagctcctgc gccgcatgat cgaggtgatg
781 acgctcctgg tgggccgtgc ctacgatccg
gccgccgacg ccttcgagct gctcgacgag
841 gtggaggccg agatcttccg gctctcggac
gtgcacctgc gcaaggcggc ccgttcgatg
901 aacgaggtcg tcaaagagac gctggagcgg
ctggaagcca ttcacggccg gccgggtggc
961 atcacgggcg ttcccagcgg cttccaccag
ctcgatgcgc tgacgggcgg ctggcaacgg
1021 ggcgatctga tcatcatcgc ggcccgtccg tcgatgggca
agaccgcctt cgcgctgagt
1081 tgtcgcaacg ccgcgctgca cccgcactac ggcacgggcg
tggccatctt ctccctggag
1141 atgggcgccg aacagctggc ccagcgcctg ctgacggccg
aggccgcgtc gatgcccagg
1201 cggcccgcac cggacggctg cgcgacgagg actggcgtaa
gctggcccgc gcggcggccg
1261 ctctcggacg cgccgatctt catcgacgac accccctcgc
tcggcgtgct cgaactccgc
1321 gccaaatgcc gccgcctgaa ggccgagcac gacatcgggc
tggtgatcgt cgactacctg
1381 cagctcatgc aggcttccca catgccgcgc aacgccaatc
gcgagcagga aatcgcccag
1441 atctcccgct cgctcaaggc actggccaag gagctgaacg
tgccggttgt ggccctctcc
1501 cagctcagcc gtgccgtcga aacccgcggc ggcgacaaac
gcccccagct ctccgatcta
1561 cgcgaaagcg gatgccttgc cggagacacc ctgattacgt
tggccgatgg acgacgtgta
1621 ccgattcgcg agctggtgag ccagcagaat ttctcggtgt
gggccctgaa tcctcagacg
1681 tatcgtctgg agcgcgcccg ggtcagcagg gcattctgca
ccgggatcaa accggtctat
1741 cgtctgacca cccggctggg ccgaagcatc cgggccacgg
ccaatcaccg atttctgact
1801 cctcagggtt ggaaacgcgt ggacgaactt cagccaggcg
actacctggc gctaccccgc
1861 cgtattccca cagcttctac cccaaccctc accgaagcag
agctggcgct actgggccac
1921 ctcatcggcg atggctgcac gcttccgcac catgtaattc
aatacacaag ccgagacgcg
1981 gatctggcaa cactggttgc acaccttgcc accaaggttt
ttggatcaaa agtgacaccc
2041 cagatccgaa aagaacttcg ctggtatcag gtataccttc
gagcagcccg gcctcttgct
2101 ccaggaaaac gaaatcctat cagcgactgg ctgagggatc
tcggaatttt tggccttcgc
2161 tcctacgaaa agaaagtacc ggctctactt ttctgtcaaa
catctgaagc catagccacc
2221 tttctccgcc acttatgggc aactgacggc tgcattcaaa
tgcgtcgggg taaaaagccc
2281 tatcccgccg tgtactatgc aaccagcagc tatcagctcg
cccgagatgt acagtcgctg
2341 cttctgcgcc ttggcattaa tgcccgcctc aaaacagttg
cccagggaga aaaagggcga
2401 gttcagtatc atgtcaaagt gagcggccgg gaagatcttt
tgcgctttgt agaaaaaatc
2461 ggtgcagtag gagctcgtca gcgggctgct cttgcatctg
tatatgatta tctgtctgtg
2521 agaacaggga atcccaatcg ggacattatt cccgttgcac
tctggtatga actggtgcgt
2581 gaagccatgt atcagcgcgg catcagccac cgtcagttac
acgccaacct gggaatggct
2641 tacggtggaa tgactctttt ccgtcagaac ctgagtcgcg
cacgcgccct gcgtcttgcc
2701 gaagctgctg cctgtccaga acttcgccag ctggctcaga
gcgatgtcta ctgggatcct
2761 atcgtttcga tcgagccgga cggcgtcgag gaggtattcg
atctgaccgt tcccggaccg
2821 cacaacttcg tggccaacga cattatcgct cataacagca
tcgagcagga tgccgacgtc
2881 gtgctgttta tctaccgacc cgagcgctac ggcattacgg
tggacgaaaa cggcaaccct
2941 accgagggta tcgccgagat cattatcggc aagcagcgca
acggtccgac cggcaccgtg
3001 cggctggctt tcatcaacca gtatgcccgc ttcgagaacc
tgacgatgta ccagccggag
3061 cccggaacgc ccctgcccga gacgccggat gagaccatcc
tgccttccgg gcctcccgac
3121 gaagcgcctt tctgaacgga aaaagccccg acgcattggg
cgccggggct tctttttgag
3181 gtgacgggcg gattcgaacc gccgtacggg gctttgcagg
cccctgccta gccactcggc
3241 cacgtcaccg tttccgctcc gtcttacgac agaacggacc
tgccggatcc