LOCUS S64572 2721 bp mRNA INV 10-JUL-1992
DEFINITION nonfibrillar collagen SpColl [Strongylocentrotus purpuratus=sea
urchin, mRNA Partial, 2721 nt].
ACCESSION S64572
NID g238616
KEYWORDS .
SOURCE purple urchin.
ORGANISM Strongylocentrotus purpuratus
Eukaryotae; mitochondrial eukaryotes; Metazoa; Echinodermata;
Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida;
Strongylocentrotidae; Strongylocentrotus.
REFERENCE 1 (bases 1 to 2721)
AUTHORS Wessel,G.M., Etkin,M. and Benson,S.
TITLE Primary mesenchyme cells of the sea urchin embryo require an
autonomously produced, nonfibrillar collagen for spiculogenesis
JOURNAL Dev. Biol. 148 (1), 261-272 (1991)
MEDLINE 92038439
REMARK GenBank staff at the National Library of Medicine created this
entry [NCBI gibbsq 64572] from the original journal article.
This sequence comes from Fig 1.
FEATURES Location/Qualifiers
source 1..2721
/organism="Strongylocentrotus purpuratus"
/db_xref="taxon:7668"
gene 1..2721
/partial
/note="cDNA clone Spcoll"
/gene="nonfibrillar collagen"
CDS 1..2721
/partial
/gene="nonfibrillar collagen"
/note="from cDNA clone Spcoll. This sequence comes from
Fig 1."
/codon_start=1
/db_xref="PID:g238617"
/translation="PGLNGEPGPPCEPGAVKVNGEKGALGPPGPPGRDGVPGYQGQKG
DRGLPGDSLRGSNGEKGDQGPRGERGTYGSPGDKGEVVYYETGTQGPKGEPGNPGTAG
PPGPAGPTGNQGLPGDQGPDGYQGEKGSQGQSGPPGNSIPGSPGEKGAQGIPGDVGQP
GQPGPTGPLGNPGIPGAFGEKGDFGPQGNPGGQGLRGLTGQPGQPGIGGERGNIGDPG
TRGRDGIPGQAGGKGETGPGGLPGGPGIKGEPGLSIPGQDGSSGTPGRDGAPGGPGEP
GPSGPRGEPAQPLLEETRITRLNGQRRPPGQPGDNGAPGNDGEPGPAGQIGVKGSPGP
LGPGGSQGPPGSPGPIGAPGEKGERGGMGTPGSPGPSGSPGAKGEPGLPGPLGEKESR
GPGGVPGSKGESGIPGRSGGIGSPGSIGLPGLNGVKGEPGIPGNSGIPGGRGLNGEPG
PAGFKGFQGLLGVKGDFGIKGQMGFPGPKGDNAQMGIPGQNGGEGFPGRSGIPGPQGA
PGSPGEPGTDGSNGGPGSKGEKGQPGIIRDLLAGWRKGVKGDPGRTGPEGAKGNPGLP
GIPGESGDAGLPGSEGRPGQPGTSGPPGPPGPNGEPGLIGRTGTPGDPGPRGERGSYG
TPGEDGIPGVKGDSGDPGLMGLPGGPGLPGPGGPPGESGFPGVRGVKGIPGTPGLSAL
GIKGEPGFPGLKGDSGQPGLNGGSGSIGLPGMKGTKGETGPVGPRSPLPPVIPGPKGE
IGIPGANGDRGDKGDRGEPGRPGFQGRPGESGSPGLNGQMGDPGGPGFQGLKGSKGEP
GPIPNVFEMKGVKGDRGGPGPDGPQGPPGRDGRPGPQGPPGLTGDKGTPGVQGNPGVS
GVPGEPGLKGEQGFRGQNGQPGDPGFPGTKGEAGIPGSSSGFFITRHSQTG"
BASE COUNT 756 a 650 c 892 g 423 t
ORIGIN
1 ccgggtctga atggagagcc aggaccacca tgtgaaccag gtgccgtcaa agtcaacgga
61 gaaaaggggg ctctaggacc accaggtccc ccaggccgcg atggagttcc aggataccag
121 ggacagaaag gagaccgtgg actcccagga gatagcctcc gtggaagtaa tggagaaaag
181 ggagaccaag gaccacgagg agagcgtgga acttacggat ccccgggaga taaaggtgaa
241 gttgtttact atgaaactgg aacacaagga cctaagggag agcccggtaa tcctggtact
301 gctgggcctc caggaccagc tggacctact ggaaatcagg gacttccggg tgaccaaggt
361 ccggatggat accaaggtga gaagggctcc caaggacaat caggacctcc aggaaactcc
421 attccaggtt ctccaggaga gaaaggtgcc caaggcatcc caggagacgt aggacaacct
481 ggtcaacctg gaccaaccgg accactgggt aaccctggaa tccctggagc tttcggcgag
541 aagggagact ttggacctca aggaaaccca ggtggacagg gactgcgggg cttgacagga
601 caaccaggtc aaccaggtat cggaggagaa aggggtaaca ttggtgaccc tggaacaaga
661 ggtcgagatg gtatcccagg acaagcagga ggaaagggtg aaactggacc aggagggcta
721 cctggtggtc caggaatcaa aggagaacct ggtctatcta tccctggtca ggacggatcc
781 agtggaaccc cagggagaga tggagcccca ggaggccctg gagaacctgg accctcaggc
841 ccgcgtggag aacctgcaca gccgctctta gaggagacaa ggatcaccag acttaatggt
901 cagaggcgac ctccaggtca acctggagac aacggagccc ctggaaatga cggagaacct
961 ggtccagccg gacaaattgg agtgaaagga tcgccgggac cacttggacc tggaggatca
1021 caaggaccac ctggatcacc tggaccgatt ggagcacctg gagaaaaggg ggaacgtggt
1081 ggcatgggaa cgccaggatc accagggccc tctggttcgc caggagctaa aggagagcca
1141 ggtttgccag gaccactcgg tgagaaggaa tcccgtggac caggtggtgt accaggatcc
1201 aaaggagaat caggaattcc aggaagatca ggaggtattg gatctcctgg ctccattggt
1261 ctaccaggac tgaatggtgt gaagggagaa ccaggtatac caggaaacag cggcattcca
1321 ggaggaagag gactaaatgg agagcctgga cccgccggat tcaagggatt ccaaggtctt
1381 ctaggggtaa agggagattt cggtatcaaa ggacaaatgg gcttccctgg acctaaggga
1441 gacaatgccc agatgggaat cccaggacag aatggaggag aaggtttccc cggaaggagt
1501 ggtattcctg gacctcaagg cgctcctggt agcccgggcg aacctggaac cgatggatcg
1561 aatggaggac cgggatcgaa gggagaaaag ggacaaccag gaatcatcag agatcttctt
1621 gcaggctgga ggaaaggagt caagggagat cctggacgga caggtcctga gggggcaaag
1681 ggcaatcctg gtcttccagg gatcccaggt gagtccggag atgcaggact cccaggatca
1741 gagggtagac caggtcaacc aggaacatct ggacctcctg gaccaccagg accaaatgga
1801 gaacctggtc ttataggaag gaccggaaca ccaggagacc caggaccaag gggagaacgc
1861 ggctcctatg gaaccccagg agaagatggt atcccaggag ttaaaggaga ctctggagat
1921 cctggcctca tgggactacc aggaggacca ggtctaccag gaccaggcgg acctccagga
1981 gaaagtggat tcccaggtgt cagaggagta aagggtattc ctggaactcc tggtttatct
2041 gcacttggca tcaagggaga acctggtttc cctggactta agggagactc cggtcaacct
2101 ggtctaaatg gtggatctgg atcaatcggt ctacctggca tgaagggaac taaaggagaa
2161 acaggccctg ttggtcctag gagcccactg ccccctgtca tccctggtcc taagggagag
2221 atcggtattc ccggagcaaa cggagaccga ggagacaagg gagatagggg agaacctggt
2281 agaccaggat tccaaggaag gccaggagaa tcaggaagcc caggtcttaa cggccaaatg
2341 ggagatcctg gaggacctgg gttccaggga ctcaaaggaa gcaagggaga accgggtcca
2401 atccctaacg tctttgaaat gaagggtgtg aaaggagacc gtggtgggcc tggtcccgat
2461 ggtcctcagg gaccaccagg acgagacgga cgtccaggtc cacagggacc accaggtctg
2521 acaggagata agggtacgcc tggagtacag gggaatcctg gagtaagtgg tgttcccgga
2581 gagccaggac tcaagggaga acaaggattc cgtgggcaga atggtcaacc aggagacccc
2641 ggtttcccag gaaccaaggg tgaggcaggt atccccggtt cgtcctctgg attcttcatt
2701 actcgtcaca gtcagaccgg a
//