LOCUS PALCOLL2 3156 bp mRNA INV 15-SEP-1990
DEFINITION P.lividus COLL2-alpha mRNA, complete cds.
ACCESSION J05422
NID g159961
KEYWORDS fibrillar collagen.
SOURCE P.lividus prism stage embryo mesenchyme, cDNA to mRNA.
ORGANISM Paracentrotus lividus
Eukaryotae; mitochondrial eukaryotes; Metazoa; Echinodermata;
Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida;
Echinidae; Paracentrotus.
REFERENCE 1 (bases 1 to 3156)
AUTHORS D'Alessio,M., Ramirez,F., Suzuki,H.R., Solursh,M. and Gambino,R.
TITLE Cloning of a fibrillar collagen gene expressed in the mesenchymal
cells of the developing sea urchin embryo
JOURNAL J. Biol. Chem. 265, 7050-7054 (1990)
MEDLINE 90216744
COMMENT Draft entry and computer readable sequence for [1] kindly provided
by F.Ramirez, 22-FEB-1990.
FEATURES Location/Qualifiers
source 1..3156
/organism="Paracentrotus lividus"
/db_xref="taxon:7656"
mat_peptide <1..2358
/note="2-alpha collagen"
CDS <1..3156
/note="2-alpha collagen precursor (COLL 2-alpha)"
/codon_start=1
/db_xref="PID:g159962"
/translation="GDVGAPGRMGAPGLQGSIGPGGVSGERGDVGIQGYVGMTGSRGP
QGQRGMRGIAGEQGPTGDSGSEGETGSAGPAGPRGPMGEIGPGGGPGMLGAPGNNGFM
GDMGEIGSPGESGSRGTNGEPGTPGQTGPNGAPGEDGLAGNDGKVGPTGTPGRDGPPG
TTGDRGNSGPPGAQGPPGIQGETGFIGNTGIQGPPGVRGDRGGDGEPGPSGQAGLPGA
PGNRGDGGIQGPVGIGGNQGPPGLPGLTGARGARGNSGISGPRGGPGVVGDVGEQGLR
GAAGIQGASGIAGERGTEGRSGRNGEVGTTGVAGSMGPPGLRGFPGPPGLRGGVGAGG
EMGMQGDRGPAGPSGGPGRTGEAGGMGPPGPMGMSGQRGDNGNPGDPGPNGPEGQKGQ
RGRAGEKGSLGIRGVPGNPGPGGAPGERGPSGLQGVKGEAGPSGSQGRTGRSGPQGNM
GARGSRGDVGNQGAIGPMGQPGMNGPPGVVGEPGPAGPVGPNGRPGEDGRAGSRGPQG
NQGLRGPPGVMGLSGPQGSSGEDGRDGPMGPSGPLGPQGTPGTFGRLGAGGFTGPPGA
AGAPGRPGSEGPTGLDGPNGDRGEPGRMGPNGPVGARGMPGSDGRDGKDGQTGPVGPV
GARGDTGPKGSNGMNGLMGERGAPGSVGPQGERGNRGKQGAQGAVGNVGDSGAGGPVG
PSGPAGPRGDVGNQGPNGHKGQNGMPGRMGMPGVSGEPGPSGENGPQGVRGIPGVVGE
NGKTGRGGPRGPPGLRGGGGSRGERGGLGVAGPPGPPGPPGPPGEATAAAMPRMPVQQ
QSKGPSQYSHYYRDEIPKTVEDLDRTKFELYLAKFDNEIRSLLEPLGSRDQPIRSCKD
LFKCFQRPKMATTGSDSNEGSIKDRFLAHCVKRGESGSPETCITPRVDEIAPARWYEG
ASGSRYDLRMGLDKFSYEASEVQLTFLRLLSTKAHQNVTYHCKNSVAVHNSQTGSTEQ
ALRLMTTSDVELSPDAPFLEQYEVIGEDGCQDRSAELSQTVIKYSTRRNTRLPIVDVA
PSDIGGVDQEFGITLGPVCFS"
BASE COUNT 794 a 733 c 1030 g 599 t
ORIGIN
1 ggagatgttg gagcacccgg cagaatggga gcccctggac ttcagggatc aattggacct
61 ggtggtgtgt ctggcgagag gggagatgtt ggaatccaag gatacgtagg aatgactgga
121 tctcgcggac ctcaaggaca aaggggaatg cgtggaattg ctggagaaca aggaccaact
181 ggagacagtg gatctgaggg agaaaccgga agcgctggac ctgctggacc ccgtggccca
241 atgggagaaa ttggacctgg aggcggacct ggaatgcttg gagctcctgg aaacaacgga
301 ttcatgggtg atatgggtga gataggaagt cctggtgagt ctggatcgag gggaaccaat
361 ggtgagcctg gcacccctgg acagactgga cccaacggcg ctcctggtga agatggtctc
421 gctggtaatg atggaaaagt tggtccaact ggcacaccag gaagggatgg accccctgga
481 actactggag acagaggaaa cagtggaccc ccaggagccc aaggaccacc aggcatccaa
541 ggagaaaccg gattcattgg caacactggt atccaaggac ccccaggagt tcgtggagat
601 cgtggcggag atggagagcc cggtccatct ggacaggctg gtcttcctgg tgctcctggt
661 aaccgtggag atggtggtat ccaaggacct gttggtattg gtggaaatca gggaccacct
721 ggtctacctg gactgactgg agcccgtgga gcacgaggaa actctggaat atctggacca
781 cgaggaggac ccggtgttgt tggtgatgtt ggagaacaag gtcttcgtgg agctgctgga
841 attcagggag cttctggtat tgctggagaa cgtggaactg agggacgttc aggacgaaac
901 ggcgaagttg gaactactgg tgtagctgga agcatggggc ccccaggtct ccgtggattc
961 cctggccccc ctggtcttcg tggtggtgtt ggagcaggtg gtgagatggg tatgcaagga
1021 gaccgtggac cagctggacc ctctggtgga ccaggaagga ctggagaagc cggtggtatg
1081 ggacctccag gacctatggg tatgagcgga caaaggggag acaatggtaa cccaggagac
1141 ccaggaccaa atggaccaga aggacaaaag ggacaacgcg gacgtgccgg agagaaggga
1201 tcattgggaa tccgtggagt ccctggaaac cccggacctg gtggtgcccc tggtgaacgt
1261 ggaccctctg gacttcaagg agtgaaggga gaggctggac cctctggtag ccagggtagg
1321 actggtagga gcgggcctca gggtaacatg ggtgctcgtg gaagccgtgg tgacgttgga
1381 aaccaaggag caattggacc tatgggacaa ccaggaatga atggaccccc aggagttgtt
1441 ggagaaccag gacctgcggg acctgttgga cctaatggcc gacctggtga agatggacgt
1501 gctggtagcc gtggacccca aggaaaccaa ggactccgtg gacccccagg agtcatggga
1561 ttgagtggac ctcagggaag ctctggagaa gatggacgtg atggacccat gggaccttct
1621 ggaccccttg gacctcaagg aacccctgga actttcggac gattgggagc tggtggattc
1681 actggacctc caggagctgc tggagcccca ggacgacccg gatctgaagg acctacagga
1741 ctcgatggac caaatggaga tcgtggagaa cctggacgca tgggacctaa cggacccgtt
1801 ggagcccgtg gaatgccagg aagtgatggc cgtgatggta aggatggaca gaccggacct
1861 gttggaccgg ttggcgcccg tggagatacc ggacccaagg gtagcaatgg aatgaacggg
1921 cttatgggag agcgtggggc ccccggatcc gttggaccac agggagaacg tggaaaccgt
1981 ggcaagcagg gagctcaagg agccgtcgga aacgtgggag attccggagc tggtggacca
2041 gttggaccat ctggacctgc tggaccccgt ggtgatgttg gtaaccaagg accaaatgga
2101 cacaagggac aaaatggaat gcccggtagg atgggtatgc caggagtttc tggtgagcct
2161 ggaccttctg gagaaaatgg accacaaggt gtccgaggta ttcctggagt tgttggagag
2221 aatggaaaga ctggacgtgg aggacctcgt ggacccccag gacttcgtgg aggcggagga
2281 tcccgtggag agcgtggagg tctcggagtt gctggaccac caggaccccc tggaccaccc
2341 ggaccaccag gtgaagccac agcggctgcc atgccacgta tgccagttca acagcaatcc
2401 aagggaccta gccagtactc tcactattac cgtgatgaga tccccaagac cgtggaagat
2461 cttgacagga ccaagttcga actgtacctg gccaagtttg acaatgaaat ccgatctcta
2521 ttggagcccc ttggtagtcg tgaccagccc atccgtagct gtaaggatct attcaagtgc
2581 ttccagaggc cgaagatggc aactactgga tcggattcta acgaaggttc catcaaggat
2641 cgtttcctgg cccactgcgt gaagcgtgga gagagcggca gcccagaaac ttgcattaca
2701 ccacgagttg acgagattgc acccgcaaga tggtacgaag gtgcatccgg atcaagatat
2761 gatctcagaa tgggtctaga taagttctct tatgaagcca gtgaagtgca actcaccttc
2821 ctacgtctac tgtccaccaa ggctcaccag aacgtcacct accactgtaa gaactctgtg
2881 gctgtacata atagtcagac tggatcaaca gagcaggctc tgagactcat gacaacatcc
2941 gatgtagagc tatcacctga tgcaccattc ttagaacaat acgaagttat tggtgaagac
3001 ggttgtcaag accgctcggc agaattgagc cagactgtta taaaatattc aaccaggaga
3061 aatacccgtc ttcctattgt tgatgttgct ccttcagaca ttggaggtgt agatcaagaa
3121 ttcggaatca ctcttggacc agtctgtttt tcatag
//